PLXNB2

Chr 22

plexin B2

Also known as: MM1, Nbla00445, PLEXB2, dJ402G11.3, lncFAL

Members of the B class of plexins, such as PLXNB2 are transmembrane receptors that participate in axon guidance and cell migration in response to semaphorins (Perrot et al. (2002) [PubMed 12183458]).[supplied by OMIM, Mar 2008]

OMIMResearchGenerating clinical summary…

Clinical highlights

Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype) and the gene is intolerant of it in the population — truncating, frameshift and canonical splice variants carry more prior weight here than missense.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
25
Pubs (1 yr)
P/LP submissions
P/LP missense
0.28
LOEUF· LoF intol.
LOF
Mechanism· G2P

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Dual constrained — LoF & missense intolerant
LoF Constraint?
0.28LOEUF
pLI 0.992
Z-score 7.10
OE 0.19 (0.130.28)
Highly constrained

Highly LoF-intolerant (top ~10% of genes)

Missense Constraint?
3.36Z-score
OE missense 0.73 (0.690.77)
896 obs / 1227.5 exp
Constrained

Highly missense-constrained (top ~0.1%)

Observed / Expected Ratios?
LoF OE?0.19 (0.130.28)
00.351.4
Missense OE?0.73 (0.690.77)
00.61.4
Synonymous OE?1.17
01.21.6
LoF obs/exp: 17 / 89.5Missense obs/exp: 896 / 1227.5Syn Z: -3.17

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

PLXNB2 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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