PLP1

Chr XXLR

proteolipid protein 1

Also known as: GPM6C, HLD1, MMPL, PLP, PLP/DM20, PMD, SPG2

The protein encoded by this gene is a transmembrane proteolipid protein that serves as the predominant component of myelin and functions in the compaction, stabilization, and maintenance of myelin sheaths. Mutations cause Pelizaeus-Merzbacher disease and X-linked spastic paraplegia type 2 through an X-linked recessive inheritance pattern. The gene is highly constrained against loss-of-function variants, and mutations can cause disease through multiple mechanisms depending on the specific variant type.

OMIMResearchSummary from RefSeq, OMIM, UniProt
LOFmechanismXLRLOEUF 0.352 OMIM phenotypes
Clinical SummaryPLP1
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Gene-Disease Validity (ClinGen)
Pelizeaus-Merzbacher spectrum disorder · XLDefinitive

Definitive — sufficient evidence for diagnostic panels

Population Constraint (gnomAD)
Highly constrained gene — heterozygous loss-of-function variants are very rare in the population (pLI 0.93). One damaged copy is likely sufficient to cause disease.
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Clinical Trials
1 active or recruiting trial — potential therapeutic options may be available

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

LoF intolerant — likely haploinsufficient
LoF Constraint
0.35LOEUF
pLI 0.928
Z-score 2.69
OE 0.00 (0.000.35)
Highly constrained

More LoF-intolerant than ~75% of genes

Missense Constraint
2.04Z-score
OE missense 0.44 (0.340.56)
45 obs / 103.3 exp
Mild constraint

Moderately missense-constrained (top ~2.5%)

Observed / Expected Ratios
LoF OE0.00 (0.000.35)
00.351.4
Missense OE0.44 (0.340.56)
00.61.4
Synonymous OE1.03
01.21.6
LoF obs/exp: 0 / 8.4Missense obs/exp: 45 / 103.3Syn Z: -0.14

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

PLP1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold
Clinical Literature
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