PLAC8

Chr 4

placenta associated 8

Also known as: C15, DGIC, PNAS-144, onzin

Predicted to enable chromatin binding activity. Predicted to be involved in positive regulation of cold-induced thermogenesis and positive regulation of transcription by RNA polymerase II. Predicted to act upstream of or within several processes, including brown fat cell differentiation; defense response to bacterium; and response to cold. Predicted to be located in azurophil granule lumen and extracellular region. [provided by Alliance of Genome Resources, Jul 2025]

0
Active trials
26
Pubs (1 yr)
0
P/LP submissions
P/LP missense
1.17
LOEUF
Multiple*
Mechanism· predicted
Clinical SummaryPLAC8
Population Constraint (gnomAD)
Low constraint (pLI 0.12) — loss-of-function variants are relatively tolerated in the population.

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
1.17LOEUF
pLI 0.120
Z-score 1.34
OE 0.38 (0.151.17)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint
1.06Z-score
OE missense 0.65 (0.510.83)
46 obs / 71.2 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios
LoF OE0.38 (0.151.17)
00.351.4
Missense OE0.65 (0.510.83)
00.61.4
Synonymous OE0.72
01.21.6
LoF obs/exp: 2 / 5.3Missense obs/exp: 46 / 71.2Syn Z: 1.16
DN
0.74top 25%
GOF
0.84top 5%
LOF
0.1895th %ile

This gene has evidence for multiple mechanisms of pathogenicity (gain-of-function and dominant-negative). Both the Badonyi & Marsh prediction and the broader genomic evidence point to gain-of-function as the predominant mechanism. Different variants in this gene may act through different mechanisms — interpret in context of the specific variant.

GOFprediction above median
DNprediction above median

Note: In-silico variant effect predictors (SIFT, PolyPhen, REVEL, CADD) may underestimate pathogenicity of missense variants in genes with GOF or DN mechanisms. Consider functional evidence and clinical context.

Predictions from Badonyi M, Marsh JA. PLoS ONE. 2024;19(8):e0307312.

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

PLAC8 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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Clinical Literature
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