PLAC4

Chr 21

placenta enriched 4

Also known as: C21orf115, PRED78

Based on the provided information, PLAC4 is predicted to encode a protein located in the plasma membrane. However, there is insufficient data provided about associated diseases, inheritance patterns, or clinical phenotypes to generate a meaningful clinical gene summary for a pediatric neurogenetics portal. Additional clinical and genetic information would be needed to create an appropriate summary for child neurologists.

Summary from RefSeq
Research Assistant →
0
Active trials
0
Pubs (1 yr)
78
P/LP submissions
P/LP missense
LOEUF
Multiple*
Mechanism· predicted
Clinical SummaryPLAC4
📋
ClinVar Variants
73 unique Pathogenic / Likely Pathogenic· 3 VUS of 77 total submissions

Population Genetics & Constraint

Constraint data not available from gnomAD.

DN
0.84top 10%
GOF
0.82top 10%
LOF
0.63top 25%

This gene has evidence for multiple mechanisms of pathogenicity (dominant-negative and gain-of-function). Both the Badonyi & Marsh prediction and the broader genomic evidence point to dominant-negative as the predominant mechanism. Different variants in this gene may act through different mechanisms — interpret in context of the specific variant.

DNprediction above median
GOFprediction above median

Note: In-silico variant effect predictors (SIFT, PolyPhen, REVEL, CADD) may underestimate pathogenicity of missense variants in genes with GOF or DN mechanisms. Consider functional evidence and clinical context.

Predictions from Badonyi M, Marsh JA. PLoS ONE. 2024;19(8):e0307312.

ClinVar Variant Classifications

77 submitted variants in ClinVar

Classification Summary

Pathogenic71
Likely Pathogenic2
VUS3
Likely Benign1
71
Pathogenic
2
Likely Pathogenic
3
VUS
1
Likely Benign

Curated Variants Distribution

Classified variants from ClinVar · 5 ACMG categories· variant type breakdown unavailable

ClassificationLoFMissense + InframeNon-codingSynonymousTotal
Pathogenic
71
Likely Pathogenic
2
VUS
3
Likely Benign
1
Benign
0
Total77

Counts from ClinVar esearch · Updated hourly

View in ClinVar →

Protein Context — Lollipop Plot

PLAC4 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →
Clinical Literature
Open Research Assistant →
Key Publications
Landmark & review papers · by relevance
PubMed
Top 1 results · since 2015Search PubMed ↗