PISD

Chr 22

phosphatidylserine decarboxylase

Also known as: DJ858B16, LIBF, PSDC, PSSC, dJ858B16.2

The protein encoded by this gene catalyzes the conversion of phosphatidylserine to phosphatidylethanolamine in the inner mitochondrial membrane. The encoded protein is active in phospholipid metabolism and interorganelle trafficking of phosphatidylserine. [provided by RefSeq, May 2016]

ResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

UniProtLiberfarb syndrome

Clinical highlights

Gene-disease validity (ClinGen)
Liberfarb syndrome · ARModerateconsider for supplementary testing
Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype) and the gene is intolerant of it in the population — truncating, frameshift and canonical splice variants carry more prior weight here than missense.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
22
Pubs (1 yr)
P/LP submissions
P/LP missense
0.58
LOEUF
LOF
Mechanism· G2P
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.58LOEUF
pLI 0.222
Z-score 2.76
OE 0.25 (0.120.58)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
0.68Z-score
OE missense 0.88 (0.790.98)
221 obs / 251.2 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.25 (0.120.58)
00.351.4
Missense OE?0.88 (0.790.98)
00.61.4
Synonymous OE?1.25
01.21.6
LoF obs/exp: 4 / 15.8Missense obs/exp: 221 / 251.2Syn Z: -2.05

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

PISD · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →