PIEZO2

Chr 18ADAR

piezo type mechanosensitive ion channel component 2

Also known as: C18orf30, C18orf58, DA3, DA5, DAIPT, FAM38B, FAM38B2, HsT748

The protein encoded by this gene contains more than thirty transmembrane domains and likely functions as part of mechanically-activated (MA) cation channels. These channels serve to connect mechanical forces to biological signals. The encoded protein quickly adapts MA currents in somatosensory neurons. Defects in this gene are a cause of type 5 distal arthrogryposis. Several alternatively spliced transcript variants of this gene have been described, but their full-length nature is not known. [provided by RefSeq, Feb 2014]

Primary Disease Associations & Inheritance

?Marden-Walker syndromeMIM #248700
AD
Arthrogryposis, distal, type 3MIM #114300
AD
Arthrogryposis, distal, type 5MIM #108145
AD
Arthrogryposis, distal, with impaired proprioception and touchMIM #617146
AR
0
ClinVar variants
0
Pathogenic / LP
0.00
pLI score
1
Active trials
Clinical SummaryPIEZO2
Population Constraint (gnomAD)
Constrained for loss-of-function variants (OE-LoF 0.28) despite low pLI — interpret in context.
💊
Clinical Trials
1 active or recruiting trial — potential therapeutic options may be available
Some data sources returned errors (1)

pubmed: Error: NCBI fetch failed: 429 https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Missense constrained — critical functional residues
LoF Constraint?LOEUF (Loss-of-function Observed/Expected Upper bound Fraction) is the upper bound of the 90% CI for LoF OE — the preferred gnomAD v4 metric. Lower = more intolerant to LoF. LOEUF < 0.35 = highly constrained.
0.37LOEUF
pLI 0.000
Z-score 7.85
OE 0.28 (0.220.37)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?Missense Z-score: standard deviations fewer missense variants observed vs. expected. Z > 3.09 (p < 0.001) = gene does not tolerate missense variation. OE missense < 0.6 is also considered constrained.
3.44Z-score
OE missense 0.75 (0.710.78)
1081 obs / 1450.1 exp
Constrained

Highly missense-constrained (top ~0.1%)

Observed / Expected Ratios?Shaded band = 90% confidence interval. Vertical tick = point estimate. Grey threshold line = gnomAD constraint cutoff for that variant class.
LoF OE?Ratio of observed to expected LoF variants. Upper CI bound (LOEUF) ≤ 0.35 = strong LoF constraint signal.0.28 (0.220.37)
00.351.4
Missense OE?Ratio of observed to expected missense variants. OE ≤ 0.6 = fewer missense variants than expected by chance.0.75 (0.710.78)
00.61.4
Synonymous OE?Control metric — synonymous variants are largely neutral and expected near OE = 1.0. Significant deviation may indicate annotation issues.0.87
01.21.6
LoF obs/exp: 40 / 140.4Missense obs/exp: 1081 / 1450.1Syn Z: 2.31

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

PIEZO2 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Gene2Phenotype Curations

PIEZO2-related arthrogryposis, distal

definitive
ADLoss Of FunctionAbsent Gene Product
Dev. Disorders
G2P ↗

PIEZO2-related ataxia, dysmetria, contractures and scoliosis with normal cognition but loss of discriminative touch perception

definitive
ARLoss Of FunctionAbsent Gene Product
Dev. Disorders
G2P ↗

Gene2Phenotype curations · DECIPHER consortium patient cohort (public variants) · deciphergenomics.org

OMIM — Genotype-Phenotype Relationships

1 OMIM entry

?Marden-Walker syndrome

MIM #248700

Molecular basis of disorder known

Autosomal dominant

Arthrogryposis, distal, type 3

MIM #114300

Molecular basis of disorder known

Autosomal dominant

Arthrogryposis, distal, type 5

MIM #108145

Molecular basis of disorder known

Autosomal dominant

Arthrogryposis, distal, with impaired proprioception and touch

MIM #617146

Molecular basis of disorder known

Autosomal recessive