PIEZO1

Chr 16ARAD

piezo type mechanosensitive ion channel component 1 (Er blood group)

Also known as: DHS, ER, FAM38A, LMPH3, LMPHM6, Mib

The protein encoded by this gene is a mechanically-activated ion channel that links mechanical forces to biological signals. The encoded protein contains 36 transmembrane domains and functions as a homotetramer. Defects in this gene have been associated with dehydrated hereditary stomatocytosis. [provided by RefSeq, Jul 2015]

OMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

[ER blood group system]MIM #620207
AR
Dehydrated hereditary stomatocytosis with or without pseudohyperkalemia and/or perinatal edemaMIM #194380
AD
Lymphatic malformation 6MIM #616843
AR

Clinical highlights

Gene-disease validity (ClinGen)
dehydrated hereditary stomatocytosis with or without pseudohyperkalemia and/or perinatal edema · ADStrongappropriate for clinical testing2 gene-disease associations curated in total
Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype), though the gene is not strongly LoF-constrained in the population — weigh truncating variants against that tolerance.Curated gene-level mechanism — a prior for triage, not a per-variant call.
2
Active trials
966
Pubs (1 yr)
P/LP submissions
P/LP missense
0.58
LOEUF
LOF
Mechanism· G2P

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.58LOEUF
pLI 0.000
Z-score 5.40
OE 0.46 (0.370.58)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
-3.43Z-score
OE missense 1.25 (1.201.29)
1905 obs / 1527.4 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios?
LoF OE?0.46 (0.370.58)
00.351.4
Missense OE?1.25 (1.201.29)
00.61.4
Synonymous OE?1.59
01.21.6
LoF obs/exp: 55 / 118.4Missense obs/exp: 1905 / 1527.4Syn Z: -12.05

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

PIEZO1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.