PCM1

Chr 8

pericentriolar material 1

Also known as: PTC4, RET/PCM-1

The protein encoded by this gene is a component of centriolar satellites, which are electron dense granules scattered around centrosomes. Inhibition studies show that this protein is essential for the correct localization of several centrosomal proteins, and for anchoring microtubules to the centrosome. Chromosomal aberrations involving this gene are associated with papillary thyroid carcinomas and a variety of hematological malignancies, including atypical chronic myeloid leukemia and T-cell lymphoma. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Oct 2015]

ResearchGenerating clinical summary…
0
Active trials
38
Pubs (1 yr)
P/LP submissions
P/LP missense
0.58
LOEUF
Mechanism
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.58LOEUF
pLI 0.000
Z-score 5.02
OE 0.45 (0.350.58)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
-6.16Z-score
OE missense 1.56 (1.501.63)
1474 obs / 942.1 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios?
LoF OE?0.45 (0.350.58)
00.351.4
Missense OE?1.56 (1.501.63)
00.61.4
Synonymous OE?1.51
01.21.6
LoF obs/exp: 43 / 96.1Missense obs/exp: 1474 / 942.1Syn Z: -7.26

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

PCM1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →