PACSIN2

Chr 22

protein kinase C and casein kinase substrate in neurons 2

Also known as: SDPII

This gene is a member of the protein kinase C and casein kinase substrate in neurons family. The encoded protein is involved in linking the actin cytoskeleton with vesicle formation by regulating tubulin polymerization. Alternative splicing results in multiple transcript variants. [provided by RefSeq, May 2010]

OMIMResearchGenerating clinical summary…

Clinical highlights

Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Based on population constraint only.
0
Active trials
11
Pubs (1 yr)
P/LP submissions
P/LP missense
0.45
LOEUF
DN
Mechanism· predicted

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.45LOEUF
pLI 0.213
Z-score 3.78
OE 0.24 (0.140.45)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
1.30Z-score
OE missense 0.79 (0.710.88)
248 obs / 312.8 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.24 (0.140.45)
00.351.4
Missense OE?0.79 (0.710.88)
00.61.4
Synonymous OE?1.04
01.21.6
LoF obs/exp: 7 / 28.9Missense obs/exp: 248 / 312.8Syn Z: -0.35

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

PACSIN2 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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