OVOL2

Chr 20

ovo like zinc finger 2

Also known as: CHED, CHED1, CHED2, EUROIMAGE566589, PPCD1, ZNF339

This gene encodes a member of the evolutionarily conserved ovo-like protein family. Mammalian members of this family contain a single zinc finger domain composed of a tetrad of C2H2 zinc fingers with variable N- and C-terminal extensions that contain intrinsically disordered domains. Members of this family are involved in epithelial development and differentiation. Knockout of this gene in mouse results in early embryonic lethality with phenotypes that include neurectoderm expansion, impaired vascularization, and heart anomalies. In humans, allelic variants of this gene have been associated with posterior polymorphous corneal dystrophy. [provided by RefSeq, Apr 2016]

ResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

UniProtCorneal dystrophy, posterior polymorphous, 1

Clinical highlights

Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
11
Pubs (1 yr)
P/LP submissions
P/LP missense
0.57
LOEUF
LOF
Mechanism· predicted
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.57LOEUF
pLI 0.709
Z-score 2.36
OE 0.12 (0.040.57)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
1.09Z-score
OE missense 0.75 (0.640.88)
114 obs / 151.8 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.12 (0.040.57)
00.351.4
Missense OE?0.75 (0.640.88)
00.61.4
Synonymous OE?0.88
01.21.6
LoF obs/exp: 1 / 8.4Missense obs/exp: 114 / 151.8Syn Z: 0.77

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

OVOL2 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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