OSCP1

Chr 1

organic solute carrier partner 1

Also known as: C1orf102, NOR1

The OSCP1 protein functions as a transmembrane transporter involved in xenobiotic detoxification and drug clearance across cellular membranes. Mutations cause autosomal recessive intellectual disability with seizures and hypotonia. This gene shows very low constraint to loss-of-function variation, consistent with recessive inheritance where heterozygous carriers are typically unaffected.

OMIMResearchSummary from RefSeq, UniProt
DNmechanismLOEUF 1.14
Clinical SummaryOSCP1
Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
1.14LOEUF
pLI 0.000
Z-score 1.05
OE 0.76 (0.521.14)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint
1.12Z-score
OE missense 0.79 (0.690.89)
172 obs / 218.6 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios
LoF OE0.76 (0.521.14)
00.351.4
Missense OE0.79 (0.690.89)
00.61.4
Synonymous OE0.95
01.21.6
LoF obs/exp: 17 / 22.4Missense obs/exp: 172 / 218.6Syn Z: 0.35
DN
0.6454th %ile
GOF
0.6150th %ile
LOF
0.2777th %ile

The highest-scoring mechanism for this gene is dominant-negative.

DNprediction above median

Note: In-silico variant effect predictors (SIFT, PolyPhen, REVEL, CADD) may underestimate pathogenicity of missense variants in genes with GOF or DN mechanisms. Consider functional evidence and clinical context.

Predictions from Badonyi M, Marsh JA. PLoS ONE. 2024;19(8):e0307312.

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

OSCP1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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Clinical Literature
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