OR8D4

Chr 11

olfactory receptor family 8 subfamily D member 4

Also known as: OR11-275

The OR8D4 protein is an olfactory receptor that recognizes specific odorant molecules and mediates smell perception through G-protein-coupled signaling in the nose. This gene has low constraint against loss-of-function variants and no established disease associations have been reported in the medical literature. OR8D4 belongs to the largest gene family in the human genome, with over 800 olfactory receptor genes contributing to our sense of smell.

Summary from RefSeq, UniProt
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0
Active trials
0
Pubs (1 yr)
0
P/LP submissions
P/LP missense
1.16
LOEUF
Multiple*
Mechanism· predicted
Clinical SummaryOR8D4
Population Constraint (gnomAD)
Low constraint (pLI 0.12) — loss-of-function variants are relatively tolerated in the population.

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
1.16LOEUF
pLI 0.123
Z-score 1.36
OE 0.37 (0.151.16)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint
-0.30Z-score
OE missense 1.07 (0.941.21)
173 obs / 162.3 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios
LoF OE0.37 (0.151.16)
00.351.4
Missense OE1.07 (0.941.21)
00.61.4
Synonymous OE1.08
01.21.6
LoF obs/exp: 2 / 5.4Missense obs/exp: 173 / 162.3Syn Z: -0.47
DN
0.88top 5%
GOF
0.84top 5%
LOF
0.1499th %ile

This gene has evidence for multiple mechanisms of pathogenicity (dominant-negative and gain-of-function). Both the Badonyi & Marsh prediction and the broader genomic evidence point to dominant-negative as the predominant mechanism. Different variants in this gene may act through different mechanisms — interpret in context of the specific variant.

DNprediction above median
GOFprediction above median

Note: In-silico variant effect predictors (SIFT, PolyPhen, REVEL, CADD) may underestimate pathogenicity of missense variants in genes with GOF or DN mechanisms. Consider functional evidence and clinical context.

Predictions from Badonyi M, Marsh JA. PLoS ONE. 2024;19(8):e0307312.

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

OR8D4 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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Clinical Literature
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Recent Gene-Specific Literature
Gene in title · MEDLINE · newest first
Europe PMC

No open access results found