NUDT1

Chr 7

nudix hydrolase 1

Also known as: MTH1

Misincorporation of oxidized nucleoside triphosphates into DNA/RNA during replication and transcription can cause mutations that may result in carcinogenesis or neurodegeneration. The protein encoded by this gene is an enzyme that hydrolyzes oxidized purine nucleoside triphosphates, such as 8-oxo-dGTP, 8-oxo-dATP, 2-hydroxy-dATP, and 2-hydroxy rATP, to monophosphates, thereby preventing misincorporation. The encoded protein is localized mainly in the cytoplasm, with some in the mitochondria, suggesting that it is involved in the sanitization of nucleotide pools both for nuclear and mitochondrial genomes. Several alternatively spliced transcript variants, some of which encode distinct isoforms, have been identified. Additional variants have been observed, but their full-length natures have not been determined. A rare single-nucleotide polymorphism that results in the production of an additional, longer isoform (p26) has been described. [provided by RefSeq, Dec 2018]

ResearchGenerating clinical summary…
1
Active trials
15
Pubs (1 yr)
P/LP submissions
P/LP missense
1.94
LOEUF
DN
Mechanism· predicted
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
1.94LOEUF
pLI 0.000
Z-score -1.63
OE 1.59 (1.011.94)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint?
-0.61Z-score
OE missense 1.16 (1.011.35)
127 obs / 109.1 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios?
LoF OE?1.59 (1.011.94)
00.351.4
Missense OE?1.16 (1.011.35)
00.61.4
Synonymous OE?1.09
01.21.6
LoF obs/exp: 14 / 8.8Missense obs/exp: 127 / 109.1Syn Z: -0.45

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

NUDT1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.