NT5M

Chr 17

5',3'-nucleotidase, mitochondrial

Also known as: dNT-2, dNT2, mdN

This gene encodes a 5' nucleotidase that localizes to the mitochondrial matrix. This enzyme dephosphorylates the 5'- and 2'(3')-phosphates of uracil and thymine deoxyribonucleotides. The gene is located within the Smith-Magenis syndrome region on chromosome 17. [provided by RefSeq, Jul 2008]

ResearchGenerating clinical summary…
0
Active trials
4
Pubs (1 yr)
P/LP submissions
P/LP missense
1.85
LOEUF
Mechanism
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
1.85LOEUF
pLI 0.000
Z-score -0.69
OE 1.25 (0.781.85)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint?
0.18Z-score
OE missense 0.95 (0.821.11)
115 obs / 120.5 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?1.25 (0.781.85)
00.351.4
Missense OE?0.95 (0.821.11)
00.61.4
Synonymous OE?1.12
01.21.6
LoF obs/exp: 11 / 8.8Missense obs/exp: 115 / 120.5Syn Z: -0.67

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

NT5M · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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