NECAB1

Chr 8

N-terminal EF-hand calcium binding protein 1

Also known as: EFCAB1, EFCBP1, STIP-1

Enables identical protein binding activity. Predicted to be involved in regulation of amyloid precursor protein biosynthetic process. Predicted to act upstream of or within blastocyst hatching. Located in cytosol and nucleoplasm. [provided by Alliance of Genome Resources, Jun 2026]

OMIMResearchGenerating clinical summary…

Clinical highlights

Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Based on population constraint only.
0
Active trials
5
Pubs (1 yr)
P/LP submissions
P/LP missense
0.58
LOEUF
Multiple*
Mechanism· predicted

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.58LOEUF
pLI 0.025
Z-score 3.04
OE 0.31 (0.170.58)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
1.14Z-score
OE missense 0.75 (0.650.87)
128 obs / 169.9 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.31 (0.170.58)
00.351.4
Missense OE?0.75 (0.650.87)
00.61.4
Synonymous OE?0.82
01.21.6
LoF obs/exp: 7 / 22.6Missense obs/exp: 128 / 169.9Syn Z: 1.11

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

NECAB1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →