NCAPG2

Chr 7AR

non-SMC condensin II complex subunit G2

Also known as: 3KS, CAP-G2, CAPG2, LUZP5, MTB, hCAP-G2

This gene encodes a protein that belongs to the Condensin2nSMC family of proteins. The encoded protein is a regulatory subunit of the condensin II complex which, along with the condensin I complex, plays a role in chromosome assembly and segregation during mitosis. A similar protein in mouse is required for early development of the embryo. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Aug 2013]

OMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

Khan-Khan-Katsanis syndromeMIM #618460
AR

Clinical highlights

Gene-disease validity (ClinGen)
Khan-Khan-Katsanis syndrome · ARLimitednot for standalone diagnostic reporting
Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
10
Pubs (1 yr)
P/LP submissions
P/LP missense
0.30
LOEUF· LoF intol.
Mechanism

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

LoF intolerant — likely haploinsufficient
LoF Constraint?
0.30LOEUF
pLI 0.978
Z-score 5.87
OE 0.18 (0.110.30)
Highly constrained

Highly LoF-intolerant (top ~10% of genes)

Missense Constraint?
1.94Z-score
OE missense 0.78 (0.720.84)
484 obs / 619.6 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.18 (0.110.30)
00.351.4
Missense OE?0.78 (0.720.84)
00.61.4
Synonymous OE?0.90
01.21.6
LoF obs/exp: 11 / 60.2Missense obs/exp: 484 / 619.6Syn Z: 1.17

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

NCAPG2 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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