NADK2

Chr 5AR

NAD kinase 2, mitochondrial

Also known as: C5orf33, DECRD, MNADK, NADKD1

This gene encodes a mitochondrial kinase that catalyzes the phosphorylation of NAD to yield NADP. Mutations in this gene result in 2,4-dienoyl-CoA reductase deficiency. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Oct 2014]

OMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

2,4-dienoyl-CoA reductase deficiencyMIM #616034
AR

Clinical highlights

Gene-disease validity (ClinGen)
progressive encephalopathy with leukodystrophy due to DECR deficiency · ARModerateconsider for supplementary testing
Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype) and the gene is intolerant of it in the population — truncating, frameshift and canonical splice variants carry more prior weight here than missense.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
15
Pubs (1 yr)
P/LP submissions
P/LP missense
0.52
LOEUF
LOF
Mechanism· G2P

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.52LOEUF
pLI 0.065
Z-score 3.37
OE 0.28 (0.160.52)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
2.05Z-score
OE missense 0.60 (0.520.70)
124 obs / 206.8 exp
Mild constraint

Moderately missense-constrained (top ~2.5%)

Observed / Expected Ratios?
LoF OE?0.28 (0.160.52)
00.351.4
Missense OE?0.60 (0.520.70)
00.61.4
Synonymous OE?0.94
01.21.6
LoF obs/exp: 7 / 25.3Missense obs/exp: 124 / 206.8Syn Z: 0.40

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

NADK2 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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