NAA10

Chr XX-linkedXLDXLR

N-alpha-acetyltransferase 10, NatA catalytic subunit

Also known as: ARD1, ARD1A, ARD1P, DXS707, LZMS, MAA, MCOPS1, NATD

N-alpha-acetylation is among the most common post-translational protein modifications in eukaryotic cells. This process involves the transfer of an acetyl group from acetyl-coenzyme A to the alpha-amino group on a nascent polypeptide and is essential for normal cell function. This gene encodes an N-terminal acetyltransferase that functions as the catalytic subunit of the major amino-terminal acetyltransferase A complex. Mutations in this gene are the cause of Ogden syndrome. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Jan 2012]

OMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

Microphthalmia, syndromic 1MIM #309800
X-linked
Ogden syndromeMIM #300855
XLDXLR
UniProtN-terminal acetyltransferase deficiency

Clinical highlights

Gene-disease validity (ClinGen)
NAA10-related syndrome · XLDefinitivesufficient evidence for diagnostic panels
Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype) and the gene is intolerant of it in the population — truncating, frameshift and canonical splice variants carry more prior weight here than missense.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
24
Pubs (1 yr)
P/LP submissions
P/LP missense
0.52
LOEUF
LOF
Mechanism· G2P

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.52LOEUF
pLI 0.762
Z-score 2.49
OE 0.11 (0.040.52)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
2.41Z-score
OE missense 0.33 (0.250.44)
33 obs / 101.2 exp
Mild constraint

Moderately missense-constrained (top ~2.5%)

Observed / Expected Ratios?
LoF OE?0.11 (0.040.52)
00.351.4
Missense OE?0.33 (0.250.44)
00.61.4
Synonymous OE?1.06
01.21.6
LoF obs/exp: 1 / 9.1Missense obs/exp: 33 / 101.2Syn Z: -0.31

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

NAA10 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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