MYSM1

Chr 1

Myb like, SWIRM and MPN domains 1

Also known as: 2A-DUB, 2ADUB, BMFS4

Enables deubiquitinase activity; histone binding activity; and transcription coactivator activity. Involved in chromatin remodeling; positive regulation of transcription by RNA polymerase II; and regulation of hemopoiesis. Located in nucleolus and nucleoplasm. Part of protein-containing complex. Implicated in diabetic retinopathy. [provided by Alliance of Genome Resources, Jul 2025]

ResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

UniProtBone marrow failure syndrome 4

Clinical highlights

Gene-disease validity (ClinGen)
bone marrow failure syndrome 4 · ARDefinitivesufficient evidence for diagnostic panels
Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype) and the gene is intolerant of it in the population — truncating, frameshift and canonical splice variants carry more prior weight here than missense.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
16
Pubs (1 yr)
P/LP submissions
P/LP missense
0.41
LOEUF
LOF
Mechanism· G2P
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.41LOEUF
pLI 0.043
Z-score 4.90
OE 0.26 (0.170.41)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
1.22Z-score
OE missense 0.83 (0.760.91)
353 obs / 423.6 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.26 (0.170.41)
00.351.4
Missense OE?0.83 (0.760.91)
00.61.4
Synonymous OE?0.95
01.21.6
LoF obs/exp: 13 / 50.6Missense obs/exp: 353 / 423.6Syn Z: 0.44

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

MYSM1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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