MTRFR

Chr 12

mitochondrial translation release factor in rescue

Also known as: C12orf65, COXPD7, SPG55, mtRF-R

This nuclear gene encodes a mitochondrial matrix protein that appears to contribute to peptide chain termination in the mitochondrial translation machinery. Two different 1 bp deletions (resulting in the same premature stop codon)result in decreased mitochondrial translation, decreased levels of oxidative phosphorylation complexes and encepthalomyopathy. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Aug 2010]

GeneReviewsResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

UniProtCombined oxidative phosphorylation deficiency 7
UniProtSpastic paraplegia 55, autosomal recessive

Clinical highlights

Gene-disease validity (ClinGen)
Leigh syndrome · ARDefinitivesufficient evidence for diagnostic panels2 gene-disease associations curated in total
Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype) and the gene is intolerant of it in the population — truncating, frameshift and canonical splice variants carry more prior weight here than missense.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
4
Pubs (1 yr)
P/LP submissions
P/LP missense
0.91
LOEUF
LOF
Mechanism· G2P
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GeneReview available — MTRFR
Authoritative clinical overview · Recommended first read
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Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
0.91LOEUF
pLI 0.209
Z-score 1.74
OE 0.29 (0.120.91)
Tolerant

Typical tolerance to LoF variation

Missense Constraint?
-0.43Z-score
OE missense 1.13 (0.961.33)
102 obs / 90.4 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios?
LoF OE?0.29 (0.120.91)
00.351.4
Missense OE?1.13 (0.961.33)
00.61.4
Synonymous OE?0.77
01.21.6
LoF obs/exp: 2 / 6.9Missense obs/exp: 102 / 90.4Syn Z: 1.13

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

MTRFR · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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