MTERF4

Chr 2

mitochondrial transcription termination factor 4

Also known as: MTERFD2

The protein regulates mitochondrial ribosome biogenesis and translation by binding to mitochondrial ribosomal RNAs and targeting the NSUN4 methyltransferase to the large ribosomal subunit. Mutations cause autosomal recessive combined oxidative phosphorylation deficiency with severe intellectual disability, growth retardation, and metabolic abnormalities. The gene shows low constraint against loss-of-function variants, suggesting haploinsufficiency is tolerated.

Summary from RefSeq, UniProt
Research Assistant →
0
Active trials
0
Pubs (1 yr)
105
P/LP submissions
0%
P/LP missense
1.10
LOEUF
Mechanism
Clinical SummaryMTERF4
Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.
📋
ClinVar Variants
103 unique Pathogenic / Likely Pathogenic· 224 VUS of 397 total submissions

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
1.10LOEUF
pLI 0.000
Z-score 1.29
OE 0.63 (0.381.10)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint
0.56Z-score
OE missense 0.89 (0.791.01)
188 obs / 210.9 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios
LoF OE0.63 (0.381.10)
00.351.4
Missense OE0.89 (0.791.01)
00.61.4
Synonymous OE1.06
01.21.6
LoF obs/exp: 9 / 14.2Missense obs/exp: 188 / 210.9Syn Z: -0.43

ClinVar Variant Classifications

397 submitted variants in ClinVar

Classification Summary

Pathogenic93
Likely Pathogenic10
VUS224
Likely Benign20
Benign5
93
Pathogenic
10
Likely Pathogenic
224
VUS
20
Likely Benign
5
Benign

Curated Variants Distribution

Classified variants from ClinVar · 5 ACMG categories

ClassificationLoFMissense + InframeNon-codingSynonymousTotal
Pathogenic
0
0
93
0
93
Likely Pathogenic
0
0
10
0
10
VUS
0
207
17
0
224
Likely Benign
0
13
1
6
20
Benign
0
2
1
2
5
Total02221228352

LoF = frameshift, stop gained/lost, canonical splice · Counts from ClinVar esearch · Updated hourly

View in ClinVar →

Protein Context — Lollipop Plot

MTERF4 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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Clinical Literature
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Recent Gene-Specific Literature
Gene in title · MEDLINE · newest first
Europe PMC