MSANTD2

Chr 11

Myb/SANT DNA binding domain containing 2

Also known as: C11orf61

ResearchGenerating clinical summary…

Clinical highlights

Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Based on population constraint only.
0
Active trials
0
Pubs (1 yr)
P/LP submissions
P/LP missense
0.37
LOEUF
LOF
Mechanism· predicted
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

LoF intolerant — likely haploinsufficient
LoF Constraint?
0.37LOEUF
pLI 0.903
Z-score 3.61
OE 0.14 (0.070.37)
Highly constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
2.30Z-score
OE missense 0.60 (0.520.68)
155 obs / 259.1 exp
Mild constraint

Moderately missense-constrained (top ~2.5%)

Observed / Expected Ratios?
LoF OE?0.14 (0.070.37)
00.351.4
Missense OE?0.60 (0.520.68)
00.61.4
Synonymous OE?0.82
01.21.6
LoF obs/exp: 3 / 20.7Missense obs/exp: 155 / 259.1Syn Z: 1.46

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

MSANTD2 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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