MRPS2

Chr 9AR

mitochondrial ribosomal protein S2

Also known as: CGI-91, COXPD36, MRP-S2, S2mt, uS2m

The protein is required for mitoribosome formation and stability, and mitochondrial translation as a component of the small 28S mitochondrial ribosomal subunit. Mutations cause combined oxidative phosphorylation deficiency 36 through autosomal recessive inheritance. The pathogenic mechanism involves impaired mitochondrial protein synthesis leading to defective oxidative phosphorylation.

OMIMResearchSummary from RefSeq, OMIM, UniProt
ARLOEUF 1.861 OMIM phenotype
Clinical SummaryMRPS2
🧬
Gene-Disease Validity (ClinGen)
mitochondrial disease · ARModerate

Moderate evidence — consider for supplementary testing

Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.
📋
ClinVar Variants
60 unique Pathogenic / Likely Pathogenic· 87 VUS of 209 total submissions

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
1.86LOEUF
pLI 0.000
Z-score -0.58
OE 1.23 (0.731.86)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint
0.07Z-score
OE missense 0.99 (0.881.11)
197 obs / 199.9 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios
LoF OE1.23 (0.731.86)
00.351.4
Missense OE0.99 (0.881.11)
00.61.4
Synonymous OE1.11
01.21.6
LoF obs/exp: 9 / 7.3Missense obs/exp: 197 / 199.9Syn Z: -0.80

ClinVar Variant Classifications

209 submitted variants in ClinVar

Classification Summary

Pathogenic55
Likely Pathogenic5
VUS87
Likely Benign38
Benign8
Conflicting8
55
Pathogenic
5
Likely Pathogenic
87
VUS
38
Likely Benign
8
Benign
8
Conflicting

Curated Variants Distribution

Classified variants from ClinVar · 5 ACMG categories

ClassificationLoFMissense + InframeNon-codingSynonymousTotal
Pathogenic
0
1
54
0
55
Likely Pathogenic
2
1
2
0
5
VUS
1
71
15
0
87
Likely Benign
0
3
10
25
38
Benign
0
7
0
1
8
Conflicting
8
Total3838126201

LoF = frameshift, stop gained/lost, canonical splice · Counts from ClinVar esearch · Updated hourly

View in ClinVar →

Protein Context — Lollipop Plot

MRPS2 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →
Clinical Literature
Open Research Assistant →
Recent Gene-Specific Literature
Gene in title · MEDLINE · newest first
Europe PMC

No open access results found