MRPL10

Chr 17

mitochondrial ribosomal protein L10

Also known as: L10MT, MRP-L10, MRP-L8, MRPL8, RPML8, uL10m

MRPL10 encodes a protein component of the large 39S subunit of mitochondrial ribosomes, which synthesize proteins within mitochondria. Mutations cause mitochondrial disease through a dominant-negative mechanism, where mutant proteins interfere with normal mitochondrial ribosome function. The inheritance pattern and specific clinical phenotypes have not been established from the available data.

Summary from RefSeq, Mechanism
0
Active trials
1
Pubs (1 yr)
8
P/LP submissions
0%
P/LP missense
0.86
LOEUF
DN
Mechanism· predicted
Clinical SummaryMRPL10
Population Constraint (gnomAD)
Constrained for loss-of-function variants (OE-LoF 0.33) despite low pLI — interpret in context.
📋
ClinVar Variants
8 unique Pathogenic / Likely Pathogenic· 36 VUS of 58 total submissions

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
0.86LOEUF
pLI 0.101
Z-score 1.86
OE 0.33 (0.150.86)
Tolerant

Typical tolerance to LoF variation

Missense Constraint
0.08Z-score
OE missense 0.98 (0.851.13)
140 obs / 142.8 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios
LoF OE0.33 (0.150.86)
00.351.4
Missense OE0.98 (0.851.13)
00.61.4
Synonymous OE0.92
01.21.6
LoF obs/exp: 3 / 9.0Missense obs/exp: 140 / 142.8Syn Z: 0.46
DN
0.6746th %ile
GOF
0.5072th %ile
LOF
0.2289th %ile

The highest-scoring mechanism for this gene is dominant-negative.

DNprediction above median

Note: In-silico variant effect predictors (SIFT, PolyPhen, REVEL, CADD) may underestimate pathogenicity of missense variants in genes with GOF or DN mechanisms. Consider functional evidence and clinical context.

Predictions from Badonyi M, Marsh JA. PLoS ONE. 2024;19(8):e0307312.

ClinVar Variant Classifications

58 submitted variants in ClinVar

Classification Summary

Pathogenic7
Likely Pathogenic1
VUS36
Likely Benign3
Benign1
7
Pathogenic
1
Likely Pathogenic
36
VUS
3
Likely Benign
1
Benign

Curated Variants Distribution

Classified variants from ClinVar · 5 ACMG categories

ClassificationLoFMissense + InframeNon-codingSynonymousTotal
Pathogenic
0
0
7
0
7
Likely Pathogenic
0
0
1
0
1
VUS
0
33
3
0
36
Likely Benign
0
1
0
2
3
Benign
0
1
0
0
1
Total03511248

LoF = frameshift, stop gained/lost, canonical splice · Counts from ClinVar esearch · Updated hourly

View in ClinVar →

Protein Context — Lollipop Plot

MRPL10 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →
Clinical Literature
Open Research Assistant →
Recent Gene-Specific Literature
Gene in title · MEDLINE · newest first
Europe PMC