MOGAT1

Chr 2

monoacylglycerol O-acyltransferase 1

Also known as: DGAT2L, DGAT2L1, MGAT1

The encoded acyl-CoA:monoacylglycerol acyltransferase catalyzes the formation of diacylglycerol from monoacylglycerol and fatty acyl-CoA, serving as a key enzyme in triacylglycerol and phospholipid synthesis. Mutations cause autosomal recessive congenital diarrhea and malabsorption, primarily affecting the gastrointestinal system with onset in infancy. The gene shows minimal constraint against loss-of-function variants (very low pLI), but has moderate intolerance to loss-of-function variation overall (LOEUF 1.548).

Summary from RefSeq, UniProt
Research Assistant →
0
Active trials
5
Pubs (1 yr)
32
P/LP submissions
0%
P/LP missense
1.55
LOEUF
DN
Mechanism· predicted
Clinical SummaryMOGAT1
Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.
📋
ClinVar Variants
32 unique Pathogenic / Likely Pathogenic· 55 VUS of 95 total submissions

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
1.55LOEUF
pLI 0.000
Z-score -0.04
OE 1.01 (0.681.55)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint
-0.46Z-score
OE missense 1.10 (0.981.24)
191 obs / 173.8 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios
LoF OE1.01 (0.681.55)
00.351.4
Missense OE1.10 (0.981.24)
00.61.4
Synonymous OE1.25
01.21.6
LoF obs/exp: 15 / 14.8Missense obs/exp: 191 / 173.8Syn Z: -1.56
DN
0.6649th %ile
GOF
0.5464th %ile
LOF
0.2776th %ile

The highest-scoring mechanism for this gene is dominant-negative.

DNprediction above median

Note: In-silico variant effect predictors (SIFT, PolyPhen, REVEL, CADD) may underestimate pathogenicity of missense variants in genes with GOF or DN mechanisms. Consider functional evidence and clinical context.

Predictions from Badonyi M, Marsh JA. PLoS ONE. 2024;19(8):e0307312.

ClinVar Variant Classifications

95 submitted variants in ClinVar

Classification Summary

Pathogenic31
Likely Pathogenic1
VUS55
Benign2
31
Pathogenic
1
Likely Pathogenic
55
VUS
2
Benign

Curated Variants Distribution

Classified variants from ClinVar · 5 ACMG categories

ClassificationLoFMissense + InframeNon-codingSynonymousTotal
Pathogenic
0
0
31
0
31
Likely Pathogenic
0
0
1
0
1
VUS
0
54
1
0
55
Likely Benign
0
0
0
0
0
Benign
0
1
0
1
2
Total05533189

LoF = frameshift, stop gained/lost, canonical splice · Counts from ClinVar esearch · Updated hourly

View in ClinVar →

Protein Context — Lollipop Plot

MOGAT1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →
Clinical Literature
Open Research Assistant →
Key Publications
Landmark & review papers · by relevance
PubMed
Top 1 results · since 2015Search PubMed ↗