MITF

Chr 3ARAD

melanocyte inducing transcription factor

Also known as: CMM8, COMMAD, MI, MITF-A, WS2, WS2A, bHLHe32

The protein encoded by this gene is a transcription factor that contains both basic helix-loop-helix and leucine zipper structural features. The encoded protein regulates melanocyte development and is responsible for pigment cell-specific transcription of the melanogenesis enzyme genes. Heterozygous mutations in the this gene cause auditory-pigmentary syndromes, such as Waardenburg syndrome type 2 and Tietz syndrome. [provided by RefSeq, Aug 2017]

GeneReviewsOMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

{Melanoma, cutaneous malignant, susceptibility to, 8}MIM #614456
COMMAD syndromeMIM #617306
AR
Tietz albinism-deafness syndromeMIM #103500
AD
Waardenburg syndrome, type 2AMIM #193510
AD
UniProtColoboma, osteopetrosis, microphthalmia, macrocephaly, albinism, and deafness

Clinical highlights

Gene-disease validity (ClinGen)
Waardenburg syndrome type 2 · ADDefinitivesufficient evidence for diagnostic panels
Interpreting a novel variant
Curated mechanisms (Gene2Phenotype) include both loss of function and gain of function. Which applies is variant-dependent — do not assume a null variant is, or isn’t, the pathogenic class without checking the specific variant.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
437
Pubs (1 yr)
P/LP submissions
P/LP missense
0.31
LOEUF· LoF intol.
Multiple*
Mechanism· G2P
📖
GeneReview available — MITF
Authoritative clinical overview · Recommended first read
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Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

LoF intolerant — likely haploinsufficient
LoF Constraint?
0.31LOEUF
pLI 0.981
Z-score 4.38
OE 0.13 (0.070.31)
Highly constrained

Highly LoF-intolerant (top ~10% of genes)

Missense Constraint?
1.47Z-score
OE missense 0.77 (0.690.85)
243 obs / 316.5 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.13 (0.070.31)
00.351.4
Missense OE?0.77 (0.690.85)
00.61.4
Synonymous OE?0.96
01.21.6
LoF obs/exp: 4 / 29.8Missense obs/exp: 243 / 316.5Syn Z: 0.36

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

MITF · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →