MINDY3

Chr 10

MINDY lysine 48 deubiquitinase 3

Also known as: C10orf97, CARP, DERP5, FAM188A, MST126, MSTP126, my042

The protein encoded by this gene contains a caspase-associated recruitment domain and may function in apoptosis. It has been identified as a tumor suppressor in lung and gastric cancers, and a polymorphism in the gene may be associated with gastric cancer risk. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, Dec 2015]

ResearchGenerating clinical summary…

Clinical highlights

Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Based on population constraint only.
0
Active trials
3
Pubs (1 yr)
P/LP submissions
P/LP missense
0.54
LOEUF
Mechanism
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.54LOEUF
pLI 0.011
Z-score 3.47
OE 0.31 (0.180.54)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
0.60Z-score
OE missense 0.89 (0.791.00)
203 obs / 228.5 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.31 (0.180.54)
00.351.4
Missense OE?0.89 (0.791.00)
00.61.4
Synonymous OE?0.94
01.21.6
LoF obs/exp: 9 / 29.2Missense obs/exp: 203 / 228.5Syn Z: 0.42

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

MINDY3 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →