MCCC2

Chr 5

methylcrotonyl-CoA carboxylase subunit 2

Also known as: MCCB, MCCCbeta

This gene encodes the small subunit of 3-methylcrotonyl-CoA carboxylase. This enzyme functions as a heterodimer and catalyzes the carboxylation of 3-methylcrotonyl-CoA to form 3-methylglutaconyl-CoA. Mutations in this gene are associated with 3-Methylcrotonylglycinuria, an autosomal recessive disorder of leucine catabolism. Alternative splicing results in multiple transcript variants encoding distinct isoforms. [provided by RefSeq, May 2018]

GeneReviewsResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

UniProt3-methylcrotonoyl-CoA carboxylase 2 deficiency

Clinical highlights

Gene-disease validity (ClinGen)
3-methylcrotonyl-CoA carboxylase deficiency · ARDefinitivesufficient evidence for diagnostic panels
Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype), though the gene is not strongly LoF-constrained in the population — weigh truncating variants against that tolerance.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
17
Pubs (1 yr)
P/LP submissions
P/LP missense
0.90
LOEUF
LOF
Mechanism· G2P
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GeneReview available — MCCC2
Authoritative clinical overview · Recommended first read
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Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
0.90LOEUF
pLI 0.000
Z-score 2.04
OE 0.63 (0.450.90)
Tolerant

Typical tolerance to LoF variation

Missense Constraint?
0.31Z-score
OE missense 0.95 (0.861.05)
298 obs / 313.2 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.63 (0.450.90)
00.351.4
Missense OE?0.95 (0.861.05)
00.61.4
Synonymous OE?1.00
01.21.6
LoF obs/exp: 22 / 35.0Missense obs/exp: 298 / 313.2Syn Z: 0.03

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

MCCC2 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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