LRRC14

Chr 8

leucine rich repeat containing 14

Also known as: LRRC14A

The protein negatively regulates Toll-like receptor-mediated NF-kappa-B signaling by disrupting IKK core complex formation through interaction with IKBKB. This gene is highly constrained against loss-of-function variants, but specific disease associations and inheritance patterns have not been established in the provided data.

OMIMResearchSummary from RefSeq, UniProt
MultiplemechanismLOEUF 1.03
Clinical SummaryLRRC14
Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
1.03LOEUF
pLI 0.000
Z-score 1.48
OE 0.57 (0.341.03)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint
1.16Z-score
OE missense 0.82 (0.740.91)
258 obs / 316.2 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios
LoF OE0.57 (0.341.03)
00.351.4
Missense OE0.82 (0.740.91)
00.61.4
Synonymous OE1.26
01.21.6
LoF obs/exp: 8 / 14.0Missense obs/exp: 258 / 316.2Syn Z: -2.44
DN
0.6939th %ile
GOF
0.6932th %ile
LOF
0.1993th %ile

This gene has evidence for multiple mechanisms of pathogenicity (gain-of-function and dominant-negative). Both the Badonyi & Marsh prediction and the broader genomic evidence point to gain-of-function as the predominant mechanism. Different variants in this gene may act through different mechanisms — interpret in context of the specific variant.

GOFprediction above median
DNprediction above median

Note: In-silico variant effect predictors (SIFT, PolyPhen, REVEL, CADD) may underestimate pathogenicity of missense variants in genes with GOF or DN mechanisms. Consider functional evidence and clinical context.

Predictions from Badonyi M, Marsh JA. PLoS ONE. 2024;19(8):e0307312.

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

LRRC14 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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Clinical Literature
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Recent Gene-Specific Literature
Gene in title · MEDLINE · newest first
Europe PMC