LRIG1

Chr 3

leucine rich repeats and immunoglobulin like domains 1

Also known as: LIG-1, LIG1

Predicted to enable signaling receptor activity. Predicted to be involved in sensory perception of sound. Predicted to act upstream of or within hair cycle process; innervation; and otolith morphogenesis. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Jun 2026]

ResearchGenerating clinical summary…

Clinical highlights

Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Based on population constraint only.
0
Active trials
37
Pubs (1 yr)
P/LP submissions
P/LP missense
0.43
LOEUF
Multiple*
Mechanism· predicted
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.43LOEUF
pLI 0.035
Z-score 4.61
OE 0.26 (0.170.43)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
-1.18Z-score
OE missense 1.13 (1.061.20)
719 obs / 635.6 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios?
LoF OE?0.26 (0.170.43)
00.351.4
Missense OE?1.13 (1.061.20)
00.61.4
Synonymous OE?1.42
01.21.6
LoF obs/exp: 12 / 45.6Missense obs/exp: 719 / 635.6Syn Z: -5.51

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

LRIG1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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