LMAN1

Chr 18AR

lectin, mannose binding 1

Also known as: ERGIC-53, ERGIC53, F5F8D, FMFD1, MCFD1, MR60, gp58

The protein encoded by this gene is a membrane mannose-specific lectin that cycles between the endoplasmic reticulum, endoplasmic reticulum-Golgi intermediate compartment, and cis-Golgi, functioning as a cargo receptor for glycoprotein transport. The protein has an N-terminal signal sequence, a calcium-dependent and pH-sensitive carbohydrate recognition domain, a stalk region that functions in oligomerization, a transmembrane domain, and a short cytoplasmic domain required for organelle targeting. Allelic variants of this gene are associated with the autosomal recessive disorder combined factor V-factor VIII deficiency. [provided by RefSeq, Jul 2015]

GeneReviewsOMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

Combined factor V and VIII deficiencyMIM #227300
AR
UniProtFactor V and factor VIII combined deficiency 1

Clinical highlights

Gene-disease validity (ClinGen)
factor V and factor VIII, combined deficiency of, type 1 · ARDefinitivesufficient evidence for diagnostic panels
Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Based on population constraint only.
0
Active trials
17
Pubs (1 yr)
P/LP submissions
P/LP missense
0.55
LOEUF
DN
Mechanism· predicted
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GeneReview available — LMAN1
Authoritative clinical overview · Recommended first read
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Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.55LOEUF
pLI 0.004
Z-score 3.50
OE 0.32 (0.200.55)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
0.06Z-score
OE missense 0.99 (0.901.09)
270 obs / 272.9 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.32 (0.200.55)
00.351.4
Missense OE?0.99 (0.901.09)
00.61.4
Synonymous OE?1.05
01.21.6
LoF obs/exp: 10 / 31.1Missense obs/exp: 270 / 272.9Syn Z: -0.38

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

LMAN1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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