LIME1

Chr 20

Lck interacting transmembrane adaptor 1

Also known as: LIME, dJ583P15.4

This gene encodes a transmembrane adaptor protein that links the T and B-cell receptor stimulation to downstream signaling pathways via its association with the Src family kinases Lck and Lyn, respectively. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, Mar 2015]

OMIMResearchGenerating clinical summary…
0
Active trials
3
Pubs (1 yr)
P/LP submissions
P/LP missense
1.65
LOEUF
Multiple*
Mechanism· predicted

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
1.65LOEUF
pLI 0.000
Z-score 0.30
OE 0.88 (0.481.65)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint?
1.06Z-score
OE missense 0.76 (0.660.89)
121 obs / 158.5 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.88 (0.481.65)
00.351.4
Missense OE?0.76 (0.660.89)
00.61.4
Synonymous OE?0.62
01.21.6
LoF obs/exp: 6 / 6.8Missense obs/exp: 121 / 158.5Syn Z: 2.63

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

LIME1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →