LGR4

Chr 11AD

leucine rich repeat containing G protein-coupled receptor 4

Also known as: BNMD17, DPSL, GPR48

The protein encoded by this gene is a G-protein coupled receptor that binds R-spondins and activates the Wnt signaling pathway. This Wnt signaling pathway activation is necessary for proper development of many organs of the body. [provided by RefSeq, Oct 2016]

OMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

{Bone mineral density, low, susceptibility to}MIM #615311
AD
Delayed puberty, self-limitedMIM #619613
AD
UniProtOsteoporosis

Clinical highlights

Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Based on population constraint only.
0
Active trials
73
Pubs (1 yr)
P/LP submissions
P/LP missense
0.38
LOEUF
Multiple*
Mechanism· predicted

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.38LOEUF
pLI 0.487
Z-score 4.64
OE 0.22 (0.130.38)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
1.21Z-score
OE missense 0.84 (0.770.92)
388 obs / 461.4 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.22 (0.130.38)
00.351.4
Missense OE?0.84 (0.770.92)
00.61.4
Synonymous OE?1.08
01.21.6
LoF obs/exp: 9 / 41.1Missense obs/exp: 388 / 461.4Syn Z: -0.87

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

LGR4 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →