LETM1

Chr 4AR

leucine zipper and EF-hand containing transmembrane protein 1

Also known as: CONDMIM, KHE, Mdm38, SLC55A1

This gene encodes a protein that is localized to the inner mitochondrial membrane. The protein functions to maintain the mitochondrial tubular shapes and is required for normal mitochondrial morphology and cellular viability. Mutations in this gene cause Wolf-Hirschhorn syndrome, a complex malformation syndrome caused by the deletion of parts of the distal short arm of chromosome 4. Related pseudogenes have been identified on chromosomes 8, 15 and 19. [provided by RefSeq, Oct 2009]

OMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

Neurodegeneration, childhood-onset, with multisystem involvement due to mitochondrial dysfunctionMIM #620089
AR
0
Active trials
14
Pubs (1 yr)
P/LP submissions
P/LP missense
0.74
LOEUF
Multiple*
Mechanism· predicted

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
0.74LOEUF
pLI 0.000
Z-score 2.70
OE 0.48 (0.320.74)
Tolerant

Typical tolerance to LoF variation

Missense Constraint?
1.58Z-score
OE missense 0.79 (0.720.86)
341 obs / 433.4 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.48 (0.320.74)
00.351.4
Missense OE?0.79 (0.720.86)
00.61.4
Synonymous OE?1.15
01.21.6
LoF obs/exp: 15 / 31.3Missense obs/exp: 341 / 433.4Syn Z: -1.65

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

LETM1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →