LCMT1

Chr 16

leucine carboxyl methyltransferase 1

Also known as: CGI-68, LCMT, PPMT1

LCMT1 catalyzes the methylation of the carboxyl group of the C-terminal leucine residue (leu309) of the catalytic subunit of protein phosphatase-2A (PPP2CA; MIM 176915) (De Baere et al., 1999 [PubMed 10600115]).[supplied by OMIM, Mar 2008]

ResearchGenerating clinical summary…
0
Active trials
6
Pubs (1 yr)
P/LP submissions
P/LP missense
0.87
LOEUF
DN
Mechanism· predicted
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
0.87LOEUF
pLI 0.000
Z-score 2.01
OE 0.53 (0.330.87)
Tolerant

Typical tolerance to LoF variation

Missense Constraint?
0.63Z-score
OE missense 0.87 (0.760.99)
160 obs / 184.0 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.53 (0.330.87)
00.351.4
Missense OE?0.87 (0.760.99)
00.61.4
Synonymous OE?1.01
01.21.6
LoF obs/exp: 11 / 20.9Missense obs/exp: 160 / 184.0Syn Z: -0.06

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

LCMT1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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