LBR

Chr 1

lamin B receptor

Also known as: C14SR, DHCR14B, LMN2R, PHA, PHASK, TDRD18

The protein encoded by this gene belongs to the ERG4/ERG24 family. It localized in the nuclear envelope inner membrane and anchors the lamina and the heterochromatin to the membrane. It may mediate interaction between chromatin and lamin B. Mutations of this gene has been associated with autosomal recessive HEM/Greenberg skeletal dysplasia. Alternative splicing occurs at this locus and two transcript variants encoding the same protein have been identified. [provided by RefSeq, Jul 2008]

ResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

UniProtPelger-Huet anomaly
UniProtGreenberg dysplasia
UniProtReynolds syndrome
UniProtRhizomelic skeletal dysplasia with or without Pelger-Huet anomaly

Clinical highlights

Gene-disease validity (ClinGen)
Greenberg dysplasia · ARModerateconsider for supplementary testing2 gene-disease associations curated in total
Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype) and the gene is intolerant of it in the population — truncating, frameshift and canonical splice variants carry more prior weight here than missense.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
376
Pubs (1 yr)
P/LP submissions
P/LP missense
0.42
LOEUF
LOF
Mechanism· G2P
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.42LOEUF
pLI 0.181
Z-score 4.29
OE 0.24 (0.140.42)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
0.29Z-score
OE missense 0.96 (0.871.05)
337 obs / 352.3 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.24 (0.140.42)
00.351.4
Missense OE?0.96 (0.871.05)
00.61.4
Synonymous OE?0.87
01.21.6
LoF obs/exp: 9 / 37.2Missense obs/exp: 337 / 352.3Syn Z: 1.19

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

LBR · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →