LAMP1

Chr 13

lysosome associated membrane protein 1

Also known as: CD107a, LAMPA, LGP120

The protein encoded by this gene is a member of a family of membrane glycoproteins. This glycoprotein provides selectins with carbohydrate ligands. It may also play a role in tumor cell metastasis. [provided by RefSeq, Jul 2008]

GeneReviewsResearchGenerating clinical summary…

Clinical highlights

Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Based on population constraint only.
0
Active trials
339
Pubs (1 yr)
P/LP submissions
P/LP missense
0.40
LOEUF
Mechanism
📖
GeneReview available — LAMP1
Authoritative clinical overview · Recommended first read
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Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.40LOEUF
pLI 0.875
Z-score 3.19
OE 0.13 (0.050.40)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
0.83Z-score
OE missense 0.85 (0.770.96)
220 obs / 257.4 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.13 (0.050.40)
00.351.4
Missense OE?0.85 (0.770.96)
00.61.4
Synonymous OE?1.06
01.21.6
LoF obs/exp: 2 / 15.6Missense obs/exp: 220 / 257.4Syn Z: -0.50

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

LAMP1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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