KRT35

Chr 17

keratin 35

Also known as: HA5, Ha-5, K35, KRTHA5, hHa5

This type I hair keratin heterodimerizes with type II keratins to form the structural framework of hair and nails. Mutations cause autosomal dominant hair disorders through a dominant-negative mechanism, where mutant keratin proteins disrupt normal keratin filament assembly. The gene shows extreme intolerance to loss-of-function mutations based on population genetics data.

Summary from RefSeq, Mechanism
0
Active trials
5
Pubs (1 yr)
6
P/LP submissions
0%
P/LP missense
0.96
LOEUF
DN
Mechanism· predicted
Clinical SummaryKRT35
Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.
📋
ClinVar Variants
6 unique Pathogenic / Likely Pathogenic· 81 VUS of 95 total submissions

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
0.96LOEUF
pLI 0.000
Z-score 1.68
OE 0.60 (0.380.96)
Tolerant

Typical tolerance to LoF variation

Missense Constraint
-0.47Z-score
OE missense 1.08 (0.981.19)
302 obs / 279.9 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios
LoF OE0.60 (0.380.96)
00.351.4
Missense OE1.08 (0.981.19)
00.61.4
Synonymous OE1.05
01.21.6
LoF obs/exp: 12 / 20.1Missense obs/exp: 302 / 279.9Syn Z: -0.44
DN
0.94top 5%
GOF
0.91top 5%
LOF
0.1598th %ile

This gene has evidence for multiple mechanisms of pathogenicity (dominant-negative and gain-of-function). Both the Badonyi & Marsh prediction and the broader genomic evidence point to dominant-negative as the predominant mechanism. Different variants in this gene may act through different mechanisms — interpret in context of the specific variant.

DNprediction above median
GOFprediction above median

Note: In-silico variant effect predictors (SIFT, PolyPhen, REVEL, CADD) may underestimate pathogenicity of missense variants in genes with GOF or DN mechanisms. Consider functional evidence and clinical context.

Predictions from Badonyi M, Marsh JA. PLoS ONE. 2024;19(8):e0307312.

ClinVar Variant Classifications

95 submitted variants in ClinVar

Classification Summary

Pathogenic6
VUS81
Likely Benign8
6
Pathogenic
81
VUS
8
Likely Benign

Curated Variants Distribution

Classified variants from ClinVar · 5 ACMG categories

ClassificationLoFMissense + InframeNon-codingSynonymousTotal
Pathogenic
0
0
6
0
6
Likely Pathogenic
0
0
0
0
0
VUS
0
81
0
0
81
Likely Benign
0
5
0
3
8
Benign
0
0
0
0
0
Total0866395

LoF = frameshift, stop gained/lost, canonical splice · Counts from ClinVar esearch · Updated hourly

View in ClinVar →

Protein Context — Lollipop Plot

KRT35 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →
Clinical Literature
Open Research Assistant →
Recent Gene-Specific Literature
Gene in title · MEDLINE · newest first
Europe PMC