KRT32

Chr 17

keratin 32

Also known as: HA2, HKA2, KRTHA2, hHa2

This protein is a type I acidic hair keratin that heterodimerizes with type II keratins to form hair and nails. Mutations cause autosomal dominant hair shaft disorders and nail abnormalities through a dominant-negative mechanism. The protein shows extremely low intolerance to loss-of-function variants, consistent with the dominant-negative pathogenic mechanism.

Summary from RefSeq, Mechanism
Research Assistant →
0
Active trials
2
Pubs (1 yr)
0
P/LP submissions
P/LP missense
1.80
LOEUF
Multiple*
Mechanism· predicted
Clinical SummaryKRT32
Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
1.80LOEUF
pLI 0.000
Z-score -1.23
OE 1.31 (0.951.80)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint
-0.61Z-score
OE missense 1.10 (1.001.22)
296 obs / 267.9 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios
LoF OE1.31 (0.951.80)
00.351.4
Missense OE1.10 (1.001.22)
00.61.4
Synonymous OE1.12
01.21.6
LoF obs/exp: 24 / 18.3Missense obs/exp: 296 / 267.9Syn Z: -0.99
DN
0.90top 5%
GOF
0.88top 5%
LOF
0.2288th %ile

This gene has evidence for multiple mechanisms of pathogenicity (dominant-negative and gain-of-function). Both the Badonyi & Marsh prediction and the broader genomic evidence point to dominant-negative as the predominant mechanism. Different variants in this gene may act through different mechanisms — interpret in context of the specific variant.

DNprediction above median
GOFprediction above median

Note: In-silico variant effect predictors (SIFT, PolyPhen, REVEL, CADD) may underestimate pathogenicity of missense variants in genes with GOF or DN mechanisms. Consider functional evidence and clinical context.

Predictions from Badonyi M, Marsh JA. PLoS ONE. 2024;19(8):e0307312.

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

KRT32 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →
Clinical Literature
Open Research Assistant →
Recent Gene-Specific Literature
Gene in title · MEDLINE · newest first
Europe PMC