KLHL20

Chr 1AD

kelch like family member 20

Also known as: KHLHX, KLEIP, KLHLX, NEDSZFB

The protein encoded by this gene is a member of the kelch family of proteins, which is characterized by a 44-56 amino acid repeat motif. The kelch motif appears in many different polypeptide contexts and contains multiple potential protein-protein contact sites. Members of this family are present both throughout the cell and extracellularly, with diverse activities. [provided by RefSeq, Jul 2008]

OMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

Neurodevelopmental disorder with early-onset seizures, facial dysmorphism, and behavioral abnormalitiesMIM #621390
AD

Clinical highlights

Gene-disease validity (ClinGen)
complex neurodevelopmental disorder · ADModerateconsider for supplementary testing
Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
5
Pubs (1 yr)
P/LP submissions
P/LP missense
0.51
LOEUF
Multiple*
Mechanism· predicted

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Missense constrained — critical functional residues
LoF Constraint?
0.51LOEUF
pLI 0.009
Z-score 3.73
OE 0.30 (0.180.51)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
3.61Z-score
OE missense 0.47 (0.410.53)
168 obs / 361.2 exp
Constrained

Highly missense-constrained (top ~0.1%)

Observed / Expected Ratios?
LoF OE?0.30 (0.180.51)
00.351.4
Missense OE?0.47 (0.410.53)
00.61.4
Synonymous OE?1.00
01.21.6
LoF obs/exp: 10 / 33.2Missense obs/exp: 168 / 361.2Syn Z: -0.02

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

KLHL20 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →