KIF1C

Chr 17

kinesin family member 1C

Also known as: LTXS1, SATX2, SAX2, SPAX2, SPG58

The protein encoded by this gene is a member of the kinesin-like protein family. The family members are microtubule-dependent molecular motors that transport organelles within cells and move chromosomes during cell division. Mutations in this gene are a cause of spastic ataxia 2, autosomal recessive. [provided by RefSeq, May 2014]

ResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

UniProtSpastic ataxia 2, autosomal recessive

Clinical highlights

Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Based on population constraint only.
0
Active trials
15
Pubs (1 yr)
P/LP submissions
P/LP missense
0.34
LOEUF· LoF intol.
Mechanism
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

LoF intolerant — likely haploinsufficient
LoF Constraint?
0.34LOEUF
pLI 0.718
Z-score 5.52
OE 0.21 (0.130.34)
Highly constrained

Highly LoF-intolerant (top ~10% of genes)

Missense Constraint?
1.40Z-score
OE missense 0.85 (0.790.91)
585 obs / 688.5 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.21 (0.130.34)
00.351.4
Missense OE?0.85 (0.790.91)
00.61.4
Synonymous OE?1.10
01.21.6
LoF obs/exp: 12 / 57.0Missense obs/exp: 585 / 688.5Syn Z: -1.29

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

KIF1C · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →