KCNJ5

Chr 11AD

potassium inwardly rectifying channel subfamily J member 5

Also known as: CIR, GIRK4, KATP1, KIR3.4, LQT13

This gene encodes an integral membrane protein which belongs to one of seven subfamilies of inward-rectifier potassium channel proteins called potassium channel subfamily J. The encoded protein is a subunit of the potassium channel which is homotetrameric. It is controlled by G-proteins and has a greater tendency to allow potassium to flow into a cell rather than out of a cell. Naturally occurring mutations in this gene are associated with aldosterone-producing adenomas. [provided by RefSeq, Aug 2017]

GeneReviewsOMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

Hyperaldosteronism, familial, type IIIMIM #613677
AD
Long QT syndrome 13MIM #613485
AD

Clinical highlights

Gene-disease validity (ClinGen)
long QT syndrome · ADDisputedevidence questions this relationship2 gene-disease associations curated in total
1
Active trials
68
Pubs (1 yr)
P/LP submissions
P/LP missense
1.14
LOEUF
Multiple*
Mechanism· predicted
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GeneReview available — KCNJ5
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Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
1.14LOEUF
pLI 0.000
Z-score 1.23
OE 0.61 (0.341.14)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint?
1.33Z-score
OE missense 0.76 (0.680.86)
190 obs / 249.0 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.61 (0.341.14)
00.351.4
Missense OE?0.76 (0.680.86)
00.61.4
Synonymous OE?1.05
01.21.6
LoF obs/exp: 7 / 11.5Missense obs/exp: 190 / 249.0Syn Z: -0.39

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

KCNJ5 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.