ITM2B

Chr 13AD

integral membrane protein 2B

Also known as: ABRI, BRI, BRI2, BRICD2B, E25B, E3-16, FBD, RDGCA

Amyloid precursor proteins are processed by beta-secretase and gamma-secretase to produce beta-amyloid peptides which form the characteristic plaques of Alzheimer disease. This gene encodes a transmembrane protein which is processed at the C-terminus by furin or furin-like proteases to produce a small secreted peptide which inhibits the deposition of beta-amyloid. Mutations which result in extension of the C-terminal end of the encoded protein, thereby increasing the size of the secreted peptide, are associated with two neurogenerative diseases, familial British dementia and familial Danish dementia. [provided by RefSeq, Oct 2009]

OMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

?Retinal dystrophy with inner retinal dysfunction and ganglion cell abnormalitiesMIM #616079
AD
Dementia, familial BritishMIM #176500
AD
Dementia, familial DanishMIM #117300
AD
UniProtCerebral amyloid angiopathy, ITM2B-related 1
UniProtCerebral amyloid angiopathy, ITM2B-related 2

Clinical highlights

Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
19
Pubs (1 yr)
P/LP submissions
P/LP missense
0.54
LOEUF
LOF
Mechanism· predicted

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.54LOEUF
pLI 0.626
Z-score 2.64
OE 0.17 (0.070.54)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
1.04Z-score
OE missense 0.75 (0.640.89)
107 obs / 141.9 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.17 (0.070.54)
00.351.4
Missense OE?0.75 (0.640.89)
00.61.4
Synonymous OE?0.84
01.21.6
LoF obs/exp: 2 / 11.8Missense obs/exp: 107 / 141.9Syn Z: 0.87

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

ITM2B · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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