ITGB2

Chr 21

integrin subunit beta 2

Also known as: CD18, LAD, LCAMB, LFA-1, MAC-1, MF17, MFI7

This gene encodes an integrin beta chain, which combines with multiple different alpha chains to form different integrin heterodimers. Integrins are integral cell-surface proteins that participate in cell adhesion as well as cell-surface mediated signalling. The encoded protein plays an important role in immune response and defects in this gene cause leukocyte adhesion deficiency. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2014]

ResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

UniProtLeukocyte adhesion deficiency 1
1
Active trials
214
Pubs (1 yr)
P/LP submissions
P/LP missense
0.99
LOEUF
Multiple*
Mechanism· predicted
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
0.99LOEUF
pLI 0.000
Z-score 1.60
OE 0.72 (0.530.99)
Tolerant

Typical tolerance to LoF variation

Missense Constraint?
0.77Z-score
OE missense 0.90 (0.830.98)
446 obs / 494.2 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.72 (0.530.99)
00.351.4
Missense OE?0.90 (0.830.98)
00.61.4
Synonymous OE?1.16
01.21.6
LoF obs/exp: 28 / 38.8Missense obs/exp: 446 / 494.2Syn Z: -1.83

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

ITGB2 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.