IFT74

Chr 9AR

intraflagellar transport 74

Also known as: BBS22, CCDC2, CMG-1, CMG1, JBTS40, SPGF58

This gene encodes a core intraflagellar transport (IFT) protein which belongs to a multi-protein complex involved in the transport of ciliary proteins along axonemal microtubules. IFT proteins are found at the base of the cilium as well as inside the cilium, where they assemble into long arrays between the ciliary base and tip. This protein, together with intraflagellar transport protein 81, binds and transports tubulin within cilia and is required for ciliogenesis. Naturally occurring mutations in this gene are associated with amyotrophic lateral sclerosis--frontotemporal dementia and Bardet-Biedl Syndrome. [provided by RefSeq, Mar 2017]

GeneReviewsOMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

Bardet-Biedl syndrome 22MIM #617119
AR
Joubert syndrome 40MIM #619582
AR
Spermatogenic failure 58MIM #619585
AR

Clinical highlights

Gene-disease validity (ClinGen)
ciliopathy-IFT74 · ARDefinitivesufficient evidence for diagnostic panels
Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype), though the gene is not strongly LoF-constrained in the population — weigh truncating variants against that tolerance.Curated gene-level mechanism — a prior for triage, not a per-variant call.
1
Active trials
4
Pubs (1 yr)
P/LP submissions
P/LP missense
0.88
LOEUF
LOF
Mechanism· G2P
📖
GeneReview available — IFT74
Authoritative clinical overview · Recommended first read
Open GeneReview ↗

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
0.88LOEUF
pLI 0.000
Z-score 2.17
OE 0.63 (0.460.88)
Tolerant

Typical tolerance to LoF variation

Missense Constraint?
-1.07Z-score
OE missense 1.17 (1.081.28)
348 obs / 296.2 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios?
LoF OE?0.63 (0.460.88)
00.351.4
Missense OE?1.17 (1.081.28)
00.61.4
Synonymous OE?1.04
01.21.6
LoF obs/exp: 26 / 41.0Missense obs/exp: 348 / 296.2Syn Z: -0.30

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

IFT74 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.