IFT70A

Chr 2

intraflagellar transport 70A

Also known as: CFAP259, FAP259, TTC30A, TTC30B

Predicted to enable intraciliary transport particle B binding activity. Predicted to be involved in intraciliary transport. Predicted to be located in centrosome. Predicted to be part of intraciliary transport particle B. Predicted to be active in axonemal microtubule. [provided by Alliance of Genome Resources, Jul 2025]

OMIMResearchGenerating clinical summary…
LOEUF 1.00
Clinical SummaryIFT70A
Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.
📋
ClinVar Variants
85 VUS of 92 total submissions

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
1.00LOEUF
pLI 0.000
Z-score 1.56
OE 0.63 (0.411.00)
Tolerant

Typical tolerance to LoF variation

Missense Constraint?
-0.61Z-score
OE missense 1.09 (1.001.19)
375 obs / 343.1 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios?
LoF OE?0.63 (0.411.00)
00.351.4
Missense OE?1.09 (1.001.19)
00.61.4
Synonymous OE?1.14
01.21.6
LoF obs/exp: 13 / 20.7Missense obs/exp: 375 / 343.1Syn Z: -1.32

ClinVar Variant Classifications

92 submitted variants in ClinVar

Classification Summary

VUS85
Likely Benign7
85
VUS
7
Likely Benign

Curated Variants Distribution

Classified variants from ClinVar · 5 ACMG categories

ClassificationLoFMissense + InframeNon-codingSynonymousTotal
Pathogenic
0
0
0
0
0
Likely Pathogenic
0
0
0
0
0
VUS
0
85
0
0
85
Likely Benign
0
7
0
0
7
Benign
0
0
0
0
0
Total0920092

LoF = frameshift, stop gained/lost, canonical splice · Counts from ClinVar esearch · Updated hourly

View in ClinVar →

28 pathogenic / likely-pathogenic (of 32) ClinVar copy-number / structural variants overlap IFT70A — these span large chromosomal regions, not the gene specifically, and are excluded from the counts above. Explore in CNV tools →

Protein Context — Lollipop Plot

IFT70A · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →