HSPE1

Chr 2

heat shock protein family E (Hsp10) member 1

Also known as: CPN10, EPF, GROES, HSP10

The protein functions as a mitochondrial co-chaperonin that works with Hsp60 to facilitate proper folding of imported proteins and prevent protein misfolding in the mitochondrial matrix. Mutations cause spastic paraplegia 13, an autosomal recessive disorder characterized by progressive spasticity primarily affecting the lower limbs. This gene is highly constrained against loss-of-function variants, reflecting its essential role in mitochondrial protein quality control.

OMIMResearchSummary from RefSeq, UniProt
LOFmechanismLOEUF 0.56
Clinical SummaryHSPE1
Population Constraint (gnomAD)
Moderately constrained gene (pLI 0.80) — some intolerance to loss-of-function variants.

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint
0.56LOEUF
pLI 0.804
Z-score 2.15
OE 0.00 (0.000.56)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint
1.45Z-score
OE missense 0.44 (0.310.62)
23 obs / 52.6 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios
LoF OE0.00 (0.000.56)
00.351.4
Missense OE0.44 (0.310.62)
00.61.4
Synonymous OE1.35
01.21.6
LoF obs/exp: 0 / 5.4Missense obs/exp: 23 / 52.6Syn Z: -1.20
DN
0.4388th %ile
GOF
0.2398th %ile
LOF
0.77top 5%

The highest-scoring mechanism for this gene is loss-of-function (haploinsufficiency).

LOFprediction above median

Predictions from Badonyi M, Marsh JA. PLoS ONE. 2024;19(8):e0307312.

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

HSPE1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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Clinical Literature
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