HSPA14

Chr 10

heat shock protein family A (Hsp70) member 14

Also known as: HSP70-4, HSP70L1

The protein functions as an ATP-dependent molecular chaperone that is part of the ribosome-associated complex, helping to fold nascent polypeptide chains as they emerge from ribosomes. Mutations cause autosomal recessive intellectual disability with variable additional features including seizures and developmental delay. The gene shows significant constraint against loss-of-function variants, suggesting that complete loss of protein function is likely pathogenic.

Summary from RefSeq, UniProt
Research Assistant →
0
Active trials
4
Pubs (1 yr)
18
P/LP submissions
0%
P/LP missense
0.40
LOEUF
DN
Mechanism· predicted
Clinical SummaryHSPA14
Population Constraint (gnomAD)
Moderately constrained gene (pLI 0.67) — some intolerance to loss-of-function variants.
📋
ClinVar Variants
18 unique Pathogenic / Likely Pathogenic· 52 VUS of 96 total submissions

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint
0.40LOEUF
pLI 0.674
Z-score 4.05
OE 0.20 (0.110.40)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint
1.17Z-score
OE missense 0.80 (0.710.89)
212 obs / 265.6 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios
LoF OE0.20 (0.110.40)
00.351.4
Missense OE0.80 (0.710.89)
00.61.4
Synonymous OE1.06
01.21.6
LoF obs/exp: 6 / 29.9Missense obs/exp: 212 / 265.6Syn Z: -0.49
DN
0.6452th %ile
GOF
0.6149th %ile
LOF
0.4430th %ile

The highest-scoring mechanism for this gene is dominant-negative.

DNprediction above median

Note: In-silico variant effect predictors (SIFT, PolyPhen, REVEL, CADD) may underestimate pathogenicity of missense variants in genes with GOF or DN mechanisms. Consider functional evidence and clinical context.

Predictions from Badonyi M, Marsh JA. PLoS ONE. 2024;19(8):e0307312.

ClinVar Variant Classifications

96 submitted variants in ClinVar

Classification Summary

Pathogenic18
VUS52
Likely Benign3
Benign2
18
Pathogenic
52
VUS
3
Likely Benign
2
Benign

Curated Variants Distribution

Classified variants from ClinVar · 5 ACMG categories

ClassificationLoFMissense + InframeNon-codingSynonymousTotal
Pathogenic
0
0
18
0
18
Likely Pathogenic
0
0
0
0
0
VUS
0
51
1
0
52
Likely Benign
0
2
1
0
3
Benign
0
0
1
1
2
Total05321175

LoF = frameshift, stop gained/lost, canonical splice · Counts from ClinVar esearch · Updated hourly

View in ClinVar →

Protein Context — Lollipop Plot

HSPA14 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →
Clinical Literature
Open Research Assistant →
Key Publications
Landmark & review papers · by relevance
PubMed
Top 1 results · since 2015Search PubMed ↗