HS3ST4

Chr 16

heparan sulfate-glucosamine 3-sulfotransferase 4

Also known as: 3-OST-4, 30ST4, 3OST4, h3-OST-4

This gene encodes the enzyme heparan sulfate D-glucosaminyl 3-O-sulfotransferase 4. This enzyme generates 3-O-sulfated glucosaminyl residues in heparan sulfate. Cell surface heparan sulfate is used as a receptor by herpes simplex virus type 1 (HSV-1), and expression of this gene is thought to play a role in HSV-1 pathogenesis. [provided by RefSeq, Jul 2008]

ResearchGenerating clinical summary…

Clinical highlights

Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Based on population constraint only.
0
Active trials
Pubs (1 yr)
P/LP submissions
P/LP missense
0.49
LOEUF
Mechanism
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.49LOEUF
pLI 0.796
Z-score 2.57
OE 0.10 (0.040.49)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
0.87Z-score
OE missense 0.82 (0.720.94)
158 obs / 192.0 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.10 (0.040.49)
00.351.4
Missense OE?0.82 (0.720.94)
00.61.4
Synonymous OE?1.20
01.21.6
LoF obs/exp: 1 / 9.6Missense obs/exp: 158 / 192.0Syn Z: -1.43

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

HS3ST4 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →