HNRNPCL1

Chr 1

heterogeneous nuclear ribonucleoprotein C like 1

Also known as: HNRPCL1

Enables identical protein binding activity. Predicted to be part of ribonucleoprotein complex. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Jul 2025]

ResearchGenerating clinical summary…

Clinical highlights

Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Based on population constraint only.
0
Active trials
0
Pubs (1 yr)
P/LP submissions
P/LP missense
1.77
LOEUF
DN
Mechanism· predicted
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
1.77LOEUF
pLI 0.373
Z-score 0.84
OE 0.00 (0.001.77)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint?
-1.38Z-score
OE missense 1.33 (1.181.50)
183 obs / 137.6 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios?
LoF OE?0.00 (0.001.77)
00.351.4
Missense OE?1.33 (1.181.50)
00.61.4
Synonymous OE?0.94
01.21.6
LoF obs/exp: 0 / 0.8Missense obs/exp: 183 / 137.6Syn Z: 0.32

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

HNRNPCL1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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